Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6238

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6237: 14605 - K20061 ALY1_2, ART3_6 arrestin-related trafficking adapter 3/6, at 321480 to 324944 14605 mRNA_6238: 14606 - K13205 AAR2, C20orf4 A1 cistron-splicing factor AAR2, at 325534 to 327076 14606

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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324,552 + 14605 mRNA_6237 0.89 -0.5
324,968 + -0.6
324,991 - 0.0
325,002 - -0.2
325,127 - -0.1
325,159 + -0.5
325,292 - 0.0
325,297 + 0.0
325,308 + -0.4
325,424 - -0.3
325,441 - 0.6
325,448 - 0.2
325,460 - -1.5
325,462 - -0.1
325,463 + 0.2
325,470 + -0.2
325,473 - 0.1
325,481 + -0.2
325,495 + 1.0
325,533 - -1.1
325,556 - 0.9
325,574 + 1.4
325,598 + 0.2
326,203 + 14606 mRNA_6238 0.43 -0.4
326,214 - 14606 mRNA_6238 0.44 -0.0
326,486 - 14606 mRNA_6238 0.62 -0.5
326,503 + 14606 mRNA_6238 0.63 -1.0
326,505 - 14606 mRNA_6238 0.63 -0.1
326,775 + 14606 mRNA_6238 0.80 -0.2
326,778 - 14606 mRNA_6238 0.81 -0.2
326,802 + 14606 mRNA_6238 0.82 -0.4
326,931 + -0.6
326,941 - 1.1
326,951 + 0.1
326,952 + 0.4
327,025 + 1.3
327,069 - 0.9
327,072 - -0.2
327,103 - 0.3
327,118 + 1.0
327,367 - 0.2
327,412 + 0.1
327,530 - -0.5
327,539 + 0.4
327,547 - 0.2
327,550 + 0.1
327,553 - 0.8
327,564 - 0.5
327,703 + 1.1
327,779 - -1.1
327,808 - -0.1
327,810 + -1.2
327,821 + 0.4
327,825 + 0.6
327,837 + -0.8
327,854 - -1.5
327,862 + 0.0
327,862 + 0.6
327,881 + -0.3
327,986 - 0.3
328,015 + 0.8
328,020 - 0.9