Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6184

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6183: 14551 - Hypothetical Protein, at 200560 to 201520 14551 mRNA_6184: 14552 - Hypothetical Protein, at 202342 to 203677 14552 mRNA_6185: 14553 - SUPERFAMILY--SSF69118, at 203886 to 204987 14553

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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201,345 + 14551 mRNA_6183 0.82 0.6
201,366 - 14551 mRNA_6183 0.84 0.1
201,399 + 14551 mRNA_6183 0.87 0.1
201,422 + 14551 mRNA_6183 0.90 -0.2
201,431 + 0.4
201,448 - -0.7
201,457 - -0.2
201,468 - -0.6
201,469 - -0.9
201,471 - 0.2
201,473 - 0.6
201,479 - 1.5
201,482 + -0.3
201,492 + 1.1
201,493 - 1.1
201,493 + 0.1
201,635 - 0.6
201,648 + -0.5
201,649 - 0.9
201,663 - 0.1
201,682 - -0.8
201,804 + 1.3
201,931 + -0.7
201,961 - -0.2
202,094 + -0.4
202,103 + -0.4
202,531 - 14552 mRNA_6184 0.14 0.5
202,626 - 14552 mRNA_6184 0.21 -0.1
202,704 + 14552 mRNA_6184 0.27 -0.7
203,055 + 14552 mRNA_6184 0.53 1.5
203,540 - 14552 mRNA_6184 0.90 -0.0
203,549 - -0.1
203,567 - 0.7
203,706 + -0.8
203,814 - 0.4
203,852 - 0.1
203,855 - 0.3
203,875 + 0.2
203,888 + 0.4
203,983 - 0.1
203,984 + -0.3
203,986 - -0.0
204,003 + 14553 mRNA_6185 0.11 -1.1
204,005 + 14553 mRNA_6185 0.11 -3.0
204,018 + 14553 mRNA_6185 0.12 -0.8
204,057 + 14553 mRNA_6185 0.16 -2.7
204,317 + 14553 mRNA_6185 0.39 1.0
204,441 + 14553 mRNA_6185 0.50 -0.1