Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6040

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6039: 14407 - Interpro F-box-like, at 1498979 to 1500418 14407 mRNA_6040: 14408 - Hypothetical Protein, at 1500526 to 1502132 14408 mRNA_6041: 14409 - Hypothetical Protein, at 1502733 to 1506557 14409

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,499,573 - 14407 mRNA_6039 0.41 -0.3
1,499,775 + 14407 mRNA_6039 0.55 -0.4
1,499,782 + 14407 mRNA_6039 0.56 0.7
1,499,782 + 14407 mRNA_6039 0.56 -0.0
1,499,785 - 14407 mRNA_6039 0.56 0.1
1,499,841 + 14407 mRNA_6039 0.60 -0.2
1,499,864 - 14407 mRNA_6039 0.61 -0.5
1,499,865 + 14407 mRNA_6039 0.62 -0.9
1,499,938 + 14407 mRNA_6039 0.67 0.5
1,499,939 + 14407 mRNA_6039 0.67 -0.2
1,499,942 - 14407 mRNA_6039 0.67 -0.4
1,500,077 - 14407 mRNA_6039 0.76 0.5
1,500,183 + 14407 mRNA_6039 0.84 1.1
1,500,224 + 14407 mRNA_6039 0.86 -1.7
1,500,227 - 14407 mRNA_6039 0.87 0.2
1,500,312 + 0.1
1,500,325 - -0.4
1,500,536 - 0.7
1,500,691 + 14408 mRNA_6040 0.10 -0.4
1,500,723 + 14408 mRNA_6040 0.12 -0.9
1,500,876 + 14408 mRNA_6040 0.22 -0.2
1,501,020 + 14408 mRNA_6040 0.31 1.8
1,501,044 - 14408 mRNA_6040 0.32 0.5
1,501,044 - 14408 mRNA_6040 0.32 -0.3
1,501,068 - 14408 mRNA_6040 0.34 -1.2
1,501,290 + 14408 mRNA_6040 0.48 -0.8
1,501,300 + 14408 mRNA_6040 0.48 0.2
1,501,464 - 14408 mRNA_6040 0.58 -0.9
1,501,504 - 14408 mRNA_6040 0.61 0.3
1,501,641 - 14408 mRNA_6040 0.69 -0.3
1,501,928 + 14408 mRNA_6040 0.87 2.0
1,501,940 + 14408 mRNA_6040 0.88 -0.1
1,502,036 - 1.7
1,502,049 - 0.3
1,502,049 + 0.2
1,502,067 + 1.5
1,502,156 + -0.4
1,502,339 + 0.8
1,502,342 - -0.7
1,502,342 - -0.0
1,502,342 - -1.1
1,502,345 - -1.4
1,502,347 + 0.8
1,502,349 + -1.4
1,502,349 + 0.1
1,502,351 - -1.3
1,502,363 - 0.6
1,502,366 + -0.5
1,502,367 + -0.3
1,502,369 - -0.7
1,502,513 - -0.6
1,502,516 - 0.5
1,502,517 + -1.2
1,502,524 + 0.1
1,502,527 - 0.1
1,502,535 + -0.3
1,502,539 + -0.0
1,502,651 - 0.9
1,502,658 + -0.4
1,502,692 - 1.4