Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5987

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5986: 14354 - Hypothetical Protein, at 1383321 to 1384747 14354 mRNA_5987: 14355 - HMMPfam-F-box-like-PF12937, at 1385071 to 1386352 14355 mRNA_5988: 14356 - K06111 EXOC4, SEC8 exocyst complex component 4, at 1386489 to 1391232 14356

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,384,230 + 14354 mRNA_5986 0.64 -0.4
1,384,236 - 14354 mRNA_5986 0.64 1.3
1,384,644 - -0.2
1,384,644 - 0.4
1,384,694 - -0.3
1,384,716 - -0.0
1,384,832 - 0.1
1,384,866 - -1.6
1,385,002 + 0.4
1,385,006 - 0.1
1,385,008 + -0.0
1,385,300 - 14355 mRNA_5987 0.18 -0.3
1,385,417 - 14355 mRNA_5987 0.27 0.4
1,385,518 - 14355 mRNA_5987 0.35 -0.9
1,385,568 + 14355 mRNA_5987 0.39 -1.2
1,385,580 - 14355 mRNA_5987 0.40 -0.0
1,385,622 + 14355 mRNA_5987 0.43 1.0
1,385,640 - 14355 mRNA_5987 0.44 0.5
1,385,718 + 14355 mRNA_5987 0.50 -1.1
1,385,761 + 14355 mRNA_5987 0.54 -0.1
1,385,766 + 14355 mRNA_5987 0.54 -0.0
1,385,810 + 14355 mRNA_5987 0.58 -0.1
1,385,907 + 14355 mRNA_5987 0.65 0.2
1,385,910 - 14355 mRNA_5987 0.65 -0.1
1,386,060 - 14355 mRNA_5987 0.77 0.7
1,386,077 + 14355 mRNA_5987 0.78 0.4
1,386,089 - 14355 mRNA_5987 0.79 -0.9
1,386,095 - 14355 mRNA_5987 0.80 0.1
1,386,103 - 14355 mRNA_5987 0.80 -0.1
1,386,202 + 14355 mRNA_5987 0.88 -0.3
1,386,314 + 0.6
1,386,563 - 0.3
1,386,630 - 0.5
1,386,730 + -0.9
1,386,747 + -0.1
1,386,783 - 0.8
1,386,930 + -1.5
1,386,980 - 14356 mRNA_5988 0.10 -0.4
1,387,021 + 14356 mRNA_5988 0.11 0.7
1,387,107 + 14356 mRNA_5988 0.13 -0.7
1,387,213 - 14356 mRNA_5988 0.15 0.3
1,387,231 + 14356 mRNA_5988 0.16 0.3
1,387,238 + 14356 mRNA_5988 0.16 -0.0