Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5919

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5918: 14286 - K11498 CENPE centromeric protein E, at 1241220 to 1242760 14286 mRNA_5919: 14287 - KOG1836 Extracellular matrix glycoprotein Laminin subunits alpha and gamma, at 1243346 to 1244488 14287 mRNA_5920: 14288 - K03022 RPC8, POLR3H DNA-directed RNA polymerase III subunit RPC8, at 1245035 to 1246181 14288

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,242,969 - 1.0
1,243,026 + 0.1
1,243,258 + -1.5
1,243,326 + -0.0
1,243,356 - 0.8
1,243,582 - 14287 mRNA_5919 0.21 0.5
1,243,609 + 14287 mRNA_5919 0.23 -0.1
1,243,670 + 14287 mRNA_5919 0.28 -1.6
1,244,004 + 14287 mRNA_5919 0.58 -0.5
1,244,006 - 14287 mRNA_5919 0.58 0.3
1,244,332 + 14287 mRNA_5919 0.86 -0.2
1,244,547 - 0.6
1,244,817 + -0.9