Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5846

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5845: 14213 - KOG1577 Aldo/keto reductase family proteins, at 1072070 to 1073549 14213 mRNA_5846: 14214 - K04508 TBL1 transducin (beta)-like 1, at 1073659 to 1076277 14214 mRNA_5847: 14215 - K17780 TIM8 mitochondrial import inner membrane translocase subunit TIM8, at 1076997 to 1077527 14215

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,073,234 + 14213 mRNA_5845 0.79 1.2
1,073,701 + 0.1
1,074,120 - 14214 mRNA_5846 0.18 1.9
1,074,120 - 14214 mRNA_5846 0.18 0.9
1,074,494 - 14214 mRNA_5846 0.32 -1.6
1,075,085 - 14214 mRNA_5846 0.54 0.1
1,075,119 + 14214 mRNA_5846 0.56 -0.3
1,075,353 - 14214 mRNA_5846 0.65 1.2
1,076,077 + 1.3
1,076,173 - -0.8
1,076,267 + 1.2
1,076,524 + 0.9