Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5772

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5771: 14139 - K00921 PIKFYVE, FAB1 1-phosphatidylinositol-3-phosphate 5-kinase, at 905200 to 913412 14139 mRNA_5772: 14140 - BLAST m serotype precursor [Moniliophthora roreri MCA 2..., at 913489 to 916106 14140 mRNA_5773: 14141 - Hypothetical Protein, at 916684 to 917418 14141

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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913,321 - 0.3
913,338 - 0.6
913,346 - -0.1
913,658 + -0.3
914,215 + 14140 mRNA_5772 0.28 0.1
914,245 + 14140 mRNA_5772 0.29 -0.1
914,411 - 14140 mRNA_5772 0.35 0.3
915,234 - 14140 mRNA_5772 0.67 0.2
915,967 - 0.3
916,106 - -1.6
916,121 + -0.2
916,150 - -1.1
916,160 - 0.3
916,183 - -0.3
916,266 - -0.5
916,266 - -1.1
916,266 - -1.7
916,272 + -0.6
916,277 - 0.5
916,285 + 0.3
916,286 - -0.3
916,289 + 0.4
916,296 - -0.1
916,420 + -0.1
916,427 - -0.3
916,437 - -0.1
916,448 + -0.8
916,448 - 0.5
916,449 - -0.6
916,456 + -0.0
916,481 + -0.2
916,739 + 0.2
916,748 + -1.0
916,896 - 14141 mRNA_5773 0.29 -0.3
916,932 + 14141 mRNA_5773 0.34 -0.2
917,052 - 14141 mRNA_5773 0.50 0.8
917,053 + 14141 mRNA_5773 0.50 -0.6