Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5755

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5755: 14123 - HMMPfam-PB1 domain-PF00564,SUPERFAMILY--SSF54277, at 868685 to 870428 14123 mRNA_5756: 14124 - HMMPfam-Myb-like DNA-binding domain-PF00249,ProSiteProfiles-Myb-like domain profile.-PS50090,ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717,SUPERFAMILY--SSF46689, at 870782 to 872057 14124

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
867,691 - -0.9
867,713 + 0.1
867,722 + -0.6
867,727 - 0.2
867,731 + -1.0
867,741 - 1.3
867,741 - 0.6
867,742 + 0.3
867,742 + 0.9
867,745 + 1.1
867,746 + -0.5
867,749 + -0.1
867,750 - -3.0
867,762 - -1.0
867,766 - 0.8
867,769 + 0.0
867,880 + 0.3
867,906 + 1.5
868,162 + 1.2
868,173 - -0.7
868,203 + 0.8
868,617 + -0.4
868,777 + -0.4
868,793 + -0.1
868,796 - 0.1
868,921 + 14123 mRNA_5755 0.14 1.3
868,925 - 14123 mRNA_5755 0.14 0.0
868,927 + 14123 mRNA_5755 0.14 -0.8
868,943 - 14123 mRNA_5755 0.15 0.6
868,959 + 14123 mRNA_5755 0.16 0.2
868,973 - 14123 mRNA_5755 0.17 0.1
869,086 + 14123 mRNA_5755 0.23 0.3
869,816 - 14123 mRNA_5755 0.65 1.1
869,818 - 14123 mRNA_5755 0.65 -0.1
869,848 + 14123 mRNA_5755 0.67 -1.4
869,983 - 14123 mRNA_5755 0.74 1.2
870,019 - 14123 mRNA_5755 0.76 -1.1
870,246 - 14123 mRNA_5755 0.90 -0.1
870,268 + 0.4
870,308 - -1.4
870,414 - -0.1
870,535 - -1.4
870,682 - 1.8
870,722 + -0.3
870,724 + 0.3
870,726 + -0.8
870,751 + 0.0
870,787 + 0.4
870,876 + -0.4
870,881 - 0.1
871,154 - 14124 mRNA_5756 0.29 -0.2