Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5734

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5734: 14102 - K01183 E3.2.1.14 chitinase, at 805175 to 807034 14102 mRNA_5735: 14103 - K12828 SF3B1, SAP155 splicing factor 3B subunit 1, at 807499 to 811509 14103

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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804,229 - -0.0
804,344 - -0.7
804,686 + 1.1
804,785 - -0.4
805,079 - -0.2
805,082 + 1.4
805,216 - 0.1
805,956 + 14102 mRNA_5734 0.42 1.7
806,821 + 14102 mRNA_5734 0.88 0.8
807,100 + -1.1
807,111 - -0.1
807,116 + 0.9
807,233 - -0.4
807,245 + 0.1
807,257 - 0.1
807,405 - 0.9
807,409 - 0.3
807,412 + -0.5
807,415 - -0.2
807,421 + 0.1
807,425 + 0.6
807,434 - -0.2
807,435 + 1.5
807,475 + 1.3