Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5713

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5712: 14080 - K03253 EIF3B translation initiation factor 3 subunit B, at 751962 to 754544 14080 mRNA_5713: 14081 - K18819 GOLS inositol 3-alpha-galactosyltransferase, at 754752 to 755900 14081 mRNA_5714: 14082 - K01409 KAE1, tsaD, QRI7 N6-L-threonylcarbamoyladenine synthase, at 755977 to 757736 14082

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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754,642 + 1.4
754,643 - 1.5
754,652 + 0.7
754,667 - 0.3
754,670 - -0.1
754,682 - -1.1
754,684 - 0.0
754,830 - 1.8
754,853 + -0.3
755,299 - 14081 mRNA_5713 0.48 -0.0
755,704 + 14081 mRNA_5713 0.83 -0.8
755,739 + 14081 mRNA_5713 0.86 0.5
755,741 - 14081 mRNA_5713 0.86 -0.9
755,829 - -1.0
755,860 - 0.1
755,865 + -2.0