Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5675

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5674: 14042 - K14560 IMP3 U3 small nucleolar ribonucleoprotein protein IMP3, at 666180 to 667115 14042 mRNA_5675: 14043 - Hypothetical Protein, at 667315 to 670414 14043 mRNA_5676: 14044 - BLAST putative protein 27 [Rhizopogon vesiculosus], at 670458 to 672345 14044

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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667,073 - 1.1
667,117 + -1.0
667,445 - -1.0
667,451 + 1.6
667,476 - -0.8
667,505 + -0.5
667,525 - 0.6
667,947 + 14043 mRNA_5675 0.20 0.4
668,075 + 14043 mRNA_5675 0.25 0.0
668,318 - 14043 mRNA_5675 0.32 1.5
668,436 + 14043 mRNA_5675 0.36 1.2
668,609 - 14043 mRNA_5675 0.42 -0.4
669,170 - 14043 mRNA_5675 0.60 0.4
669,493 - 14043 mRNA_5675 0.70 -0.7
669,555 + 14043 mRNA_5675 0.72 -0.6
669,728 + 14043 mRNA_5675 0.78 0.4
669,883 + 14043 mRNA_5675 0.83 0.7
669,924 + 14043 mRNA_5675 0.84 -0.5
670,175 - -1.3
670,178 + 1.1
670,202 - 0.1
670,238 + -1.0
670,406 - 0.1
670,411 + -1.5
670,424 - -0.5
670,699 + 14044 mRNA_5676 0.13 0.6
670,702 + 14044 mRNA_5676 0.13 1.7
670,876 - 14044 mRNA_5676 0.22 0.4