Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5617

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5616: 13984 - HMMPfam-GRF zinc finger-PF06839, at 521417 to 522202 13984 mRNA_5617: 13985 - BLAST beta-flanking protein [Kwoniella dejecticola CBS ..., at 522586 to 523883 13985 mRNA_5618: 13986 - K09866 AQP4 aquaporin-4, at 524423 to 526190 13986

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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521,634 - 13984 mRNA_5616 0.28 0.5
521,982 - 13984 mRNA_5616 0.72 -0.3
522,386 + -0.0
522,389 - 0.3
522,523 - -0.2
522,529 - 0.0
522,844 - 13985 mRNA_5617 0.20 -1.8
522,846 - 13985 mRNA_5617 0.20 0.7
522,860 - 13985 mRNA_5617 0.21 -1.1
523,003 + 13985 mRNA_5617 0.32 0.7
523,728 + 13985 mRNA_5617 0.88 -1.1
523,832 - 0.8
523,985 - -0.2
524,050 + -1.2
524,100 - 0.6
524,192 + 0.2
524,544 + -0.1
524,665 - 13986 mRNA_5618 0.14 -0.2
524,682 - 13986 mRNA_5618 0.15 -0.3
524,810 + 13986 mRNA_5618 0.22 1.4