Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5548

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5547: 13915 - K08994 yneE putative membrane protein, at 344428 to 346193 13915 mRNA_5548: 13916 - KOG4006 Anti-proliferation factor BTG1/TOB, at 346631 to 348391 13916 mRNA_5549: 13917 - K00027 ME2, sfcA, maeA malate dehydrogenase (oxaloacetate-decarboxylating), at 349196 to 351953 13917

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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345,869 + 13915 mRNA_5547 0.82 0.6
345,924 - 13915 mRNA_5547 0.85 0.3
346,758 + 0.0
346,759 + -0.6
346,872 + 13916 mRNA_5548 0.14 0.6
348,259 + 0.9
348,390 + 0.2
348,436 + 0.3
348,561 - -1.2
348,592 + -0.4
348,705 - 1.2
348,713 - 1.5
348,723 + -0.9
348,727 + -1.0
348,727 + -0.2
348,730 + -0.8
348,730 - -1.3
348,730 + -1.2
348,733 - -0.4
348,735 - -0.2
348,739 - 1.4
348,875 - 0.9
348,877 - 0.1
348,896 - 0.0
349,034 - -0.1
349,045 - 0.2
349,148 + -0.8
349,164 + 0.1
349,171 + 0.2
349,177 - -2.0
349,186 + 0.3
349,309 - -0.7
349,320 + -0.3