Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5481

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5480: 13848 - Hypothetical Protein, at 198378 to 198864 13848 mRNA_5481: 13849 - KOG2710 Rho GTPase-activating protein, at 199332 to 200672 13849 mRNA_5482: 13850 - Hypothetical Protein, at 201045 to 202061 13850

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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198,358 - 1.4
198,636 + 13848 mRNA_5480 0.53 -0.1
198,651 + 13848 mRNA_5480 0.56 -1.3
198,698 - 13848 mRNA_5480 0.66 -0.0
198,782 - 13848 mRNA_5480 0.83 -1.1
198,788 - 13848 mRNA_5480 0.84 -1.0
198,797 - 13848 mRNA_5480 0.86 0.1
198,811 - 13848 mRNA_5480 0.89 0.1
198,989 + 1.3
199,095 + 0.1
199,335 - 0.4
199,392 + 0.3
199,480 + 13849 mRNA_5481 0.11 -1.0
199,514 - 13849 mRNA_5481 0.14 -1.0
199,644 - 13849 mRNA_5481 0.23 -1.3
199,684 - 13849 mRNA_5481 0.26 -0.2
199,812 + 13849 mRNA_5481 0.36 0.1
199,916 - 13849 mRNA_5481 0.44 -0.6
200,071 - 13849 mRNA_5481 0.55 0.0
200,156 + 13849 mRNA_5481 0.61 1.1
200,237 - 13849 mRNA_5481 0.67 0.4
200,240 + 13849 mRNA_5481 0.68 2.2
200,559 - 1.3
200,770 + -0.4
201,004 - 0.1
201,244 + 13850 mRNA_5482 0.20 1.2
201,247 - 13850 mRNA_5482 0.20 -0.3