Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5322

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5321: 13689 - K11108 RCL1 RNA 3'-terminal phosphate cyclase-like protein, at 451164 to 452723 13689 mRNA_5322: 13690 - K01120 cpdP 3',5'-cyclic-nucleotide phosphodiesterase, at 452870 to 455692 13690 mRNA_5323: 13691 - K10842 MNAT1 CDK-activating kinase assembly factor MAT1, at 456066 to 457717 13691

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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453,205 - 13690 mRNA_5322 0.12 -0.9
453,448 - 13690 mRNA_5322 0.20 -0.6
453,867 + 13690 mRNA_5322 0.35 0.8
454,013 + 13690 mRNA_5322 0.40 -0.3
454,287 + 13690 mRNA_5322 0.50 -1.2
454,739 + 13690 mRNA_5322 0.66 -0.2
455,002 - 13690 mRNA_5322 0.76 -0.5
455,153 - 13690 mRNA_5322 0.81 0.5
455,297 - 13690 mRNA_5322 0.86 -1.4
455,474 + 0.1
455,748 - 0.3
455,768 - 1.3
455,776 + -0.2
455,787 + -0.5
455,807 + -0.8