Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5314

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5313: 13681 - KOG0108 mRNA cleavage and polyadenylation factor I complex, subunit RNA15, at 430404 to 433324 13681 mRNA_5314: 13682 - Hypothetical Protein, at 433901 to 435484 13682 mRNA_5315: 13683 - K06158 ABCF3 ATP-binding cassette, subfamily F, member 3, at 436318 to 439528 13683

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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433,261 + 0.7
433,266 + -0.6
433,367 + 0.0
433,507 + -0.5
433,538 + -0.5
433,664 - -0.8
433,732 + -0.4
433,799 - 2.1
433,815 - 0.6
433,988 + 0.0
434,102 - 13682 mRNA_5314 0.13 -0.6
434,108 - 13682 mRNA_5314 0.13 -0.2
434,127 + 13682 mRNA_5314 0.14 -1.8
434,129 - 13682 mRNA_5314 0.14 1.3
434,154 + 13682 mRNA_5314 0.16 -0.3
434,232 + 13682 mRNA_5314 0.21 0.1
434,238 + 13682 mRNA_5314 0.21 -0.3
434,245 + 13682 mRNA_5314 0.22 -1.1
434,266 - 13682 mRNA_5314 0.23 0.3
434,368 + 13682 mRNA_5314 0.29 0.6
434,501 + 13682 mRNA_5314 0.38 -0.9
434,724 + 13682 mRNA_5314 0.52 1.3
434,805 + 13682 mRNA_5314 0.57 0.8
434,825 + 13682 mRNA_5314 0.58 -0.9
434,841 - 13682 mRNA_5314 0.59 -1.3
434,856 - 13682 mRNA_5314 0.60 -0.3
435,279 + 13682 mRNA_5314 0.87 0.0
435,296 - 13682 mRNA_5314 0.88 -0.7
435,449 - -0.2
435,453 + -0.6
435,456 - 0.8
435,469 + -0.2
435,755 - -1.4
435,848 - -0.3
435,903 - 0.1
436,185 - -1.4