Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5264

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5263: 13631 - BLAST pyruvate dehydrogenase E1 component subunit alpha [Mi..., at 309267 to 309581 13631 mRNA_5264: 13632 - Hypothetical Protein, at 310145 to 311167 13632 mRNA_5265: 13633 - K18749 LSM14, RAP55, SCD6 protein LSM14, at 311622 to 313606 13633

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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309,159 - -0.3
309,174 - -0.1
309,201 + -0.2
309,298 - 0.3
309,311 - 13631 mRNA_5263 0.14 0.4
309,440 - 13631 mRNA_5263 0.55 -0.2
309,452 + 13631 mRNA_5263 0.59 -0.1
309,462 - 13631 mRNA_5263 0.62 0.2
309,768 + -1.4
309,782 + -0.8
309,784 - 0.8
309,855 + 0.1
309,855 - -0.8
309,875 + -1.8
309,881 - -1.2
309,885 - -0.7
309,909 + -0.2
309,920 - 0.2
309,923 - 1.0
309,935 - 0.8
309,948 + -0.1
310,064 - 0.7
310,065 - 0.2
310,072 - -0.1
310,078 + -1.0
310,090 - -0.2
310,218 - 0.3
310,360 - 13632 mRNA_5264 0.21 -0.3
310,392 + 13632 mRNA_5264 0.24 -1.3
310,393 - 13632 mRNA_5264 0.24 -0.3
310,652 - 13632 mRNA_5264 0.50 -0.6
310,979 + 13632 mRNA_5264 0.82 -1.8
311,506 - 0.3
311,523 + -0.7
311,542 - -0.7
311,544 + -0.0
311,680 + 1.1
311,684 - -0.2
311,695 + -0.3
311,819 - 0.2
311,820 - 0.4
311,846 + 13633 mRNA_5265 0.11 0.2
311,855 + 13633 mRNA_5265 0.12 -0.2
312,021 + 13633 mRNA_5265 0.20 0.8