Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5243

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5243: 13611 - KOG1601 GATA-4/5/6 transcription factors, at 247199 to 251043 13611 mRNA_5244: 13612 - HMMPfam-Glycosyl Hydrolase Family 88-PF07470,SUPERFAMILY--SSF48208, at 251965 to 253364 13612

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
246,283 - 0.9
246,293 + -0.5
246,297 + 0.0
246,306 + 1.2
246,447 + -0.7
246,451 + 0.4
246,459 + -0.2
246,477 + -0.7
246,597 - -1.4
246,601 + -2.3
246,608 + 0.5
246,612 - -0.3
246,613 + -0.4
246,613 - -0.2
246,614 + 0.0
246,626 - 0.4
246,630 + -3.2
246,631 - -0.0
246,634 + -0.1
246,636 + 0.6
246,664 + 0.6
246,677 - 1.8
246,719 - -1.4
246,729 + -3.5
246,734 - -0.2
246,736 + -0.1
246,736 + -0.2
246,742 - 1.1
246,750 + -0.8
246,752 + 0.1
246,757 + 0.2
246,878 + -0.0
246,934 + -0.6
246,936 + 0.4
246,957 + -0.1
246,957 - -0.2
246,960 + -0.2
246,961 - 0.1
246,961 + 2.3
246,962 - 0.7
246,963 + 0.6
246,966 + -0.1
246,970 - -0.4
246,971 - -0.7
246,974 - 0.3
246,976 + -0.0
246,984 + 0.0
246,986 - -0.4
246,987 + -0.2
246,988 - 0.6
246,993 + -0.4
246,998 + 2.5
247,082 - 0.6
247,144 + -0.2
247,274 + 0.2
247,287 + -0.1
247,287 + -0.6
247,293 + 0.3
247,426 + 0.1
247,437 - -1.4
247,447 - 1.4
247,574 + 0.4
247,705 + 13611 mRNA_5243 0.13 -2.1
248,025 + 13611 mRNA_5243 0.21 0.6
248,229 - 13611 mRNA_5243 0.27 0.2
248,275 - 13611 mRNA_5243 0.28 0.9
248,450 + 13611 mRNA_5243 0.33 0.3
248,569 + 13611 mRNA_5243 0.36 -0.2
248,876 + 13611 mRNA_5243 0.44 -0.7
248,906 + 13611 mRNA_5243 0.44 -0.6
249,144 - 13611 mRNA_5243 0.51 -0.0
249,180 + 13611 mRNA_5243 0.52 0.3
249,324 - 13611 mRNA_5243 0.55 -0.7
249,768 + 13611 mRNA_5243 0.67 -0.7
250,029 - 13611 mRNA_5243 0.74 0.4
250,367 + 13611 mRNA_5243 0.82 0.4
250,466 - 13611 mRNA_5243 0.85 -0.6
250,902 - 0.8
251,028 - 0.2
251,062 - 0.5
251,190 - -0.0
251,197 - 0.7
251,216 - 1.1
251,218 + 0.5
251,225 - -0.9
251,231 + 0.0
251,233 - 2.6
251,241 + 0.3
251,351 + 0.7
251,354 - 2.2
251,356 - -1.1
251,356 - 1.2
251,365 - -0.0
251,366 + -0.9
251,368 + 0.7
251,369 - 0.0
251,372 + -0.5
251,372 - 0.3
251,373 + -0.7
251,375 - -0.9
251,388 + -0.1
251,392 + 0.8
251,397 - 0.0
251,412 - -0.2
251,414 + 1.0
251,421 - -0.3
251,423 - -0.5
251,425 + 0.7
251,528 + -0.2
251,535 + 0.4
251,537 - -1.8
251,553 + -0.4
251,560 - -0.0
251,561 - 0.4
251,681 + 0.5
251,685 + -0.8
251,702 + 1.1
251,719 + 0.8
251,753 + 0.6
251,755 - -0.9
251,810 - 0.5
251,827 - 1.1
251,835 + -0.2