Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5230

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5230: 13598 - K17906 ATG2 autophagy-related protein 2, at 209416 to 215994 13598 mRNA_5231: 13599 - Hypothetical Protein, at 216501 to 218178 13599

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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208,778 + -2.2
208,793 + 1.4
208,812 + 0.2
208,922 - 0.2
208,964 + -0.0
209,051 + 0.7
209,071 + 0.5
209,076 + -1.0
209,085 + 0.4
209,219 + -0.2
209,327 + -0.5
209,389 - -0.5
209,418 + 0.0
209,521 - 0.2
209,764 - -1.2
209,785 - -2.8
209,790 - 2.2
209,821 - -0.0
209,908 + 0.2
209,932 + 0.8
209,950 - 0.3
209,988 - 0.3
210,057 - -0.4
210,073 + 1.1
210,125 + 13598 mRNA_5230 0.11 -0.4
210,467 + 13598 mRNA_5230 0.16 0.3
210,659 - 13598 mRNA_5230 0.19 0.7
210,674 - 13598 mRNA_5230 0.19 -0.7
210,725 - 13598 mRNA_5230 0.20 -0.7
210,768 + 13598 mRNA_5230 0.21 0.2
210,878 + 13598 mRNA_5230 0.22 -0.7
211,094 - 13598 mRNA_5230 0.26 0.6
211,098 + 13598 mRNA_5230 0.26 -0.3
211,533 + 13598 mRNA_5230 0.32 -0.8
211,624 + 13598 mRNA_5230 0.34 0.6
211,629 - 13598 mRNA_5230 0.34 -2.3
211,728 - 13598 mRNA_5230 0.35 1.2
211,939 - 13598 mRNA_5230 0.38 -0.0
211,942 + 13598 mRNA_5230 0.38 1.0
212,045 + 13598 mRNA_5230 0.40 0.1
212,077 + 13598 mRNA_5230 0.40 -0.3
212,209 + 13598 mRNA_5230 0.42 0.1
212,508 + 13598 mRNA_5230 0.47 1.7
212,536 + 13598 mRNA_5230 0.47 2.3
212,848 - 13598 mRNA_5230 0.52 -1.4
212,910 - 13598 mRNA_5230 0.53 -0.2
213,045 + 13598 mRNA_5230 0.55 0.1
213,103 - 13598 mRNA_5230 0.56 -0.2
213,375 + 13598 mRNA_5230 0.60 0.2
213,384 - 13598 mRNA_5230 0.60 1.8
213,768 + 13598 mRNA_5230 0.66 0.9
213,795 + 13598 mRNA_5230 0.67 1.3
213,906 + 13598 mRNA_5230 0.68 -0.1
214,375 + 13598 mRNA_5230 0.75 0.9
214,906 + 13598 mRNA_5230 0.83 -0.1
214,937 + 13598 mRNA_5230 0.84 0.2
215,355 - -0.5
215,380 - -0.1
215,386 + 0.0
215,573 + 1.3
215,649 + -0.4
215,652 - -0.4
215,807 + 0.0
215,920 + -0.1
215,947 + 1.1
215,952 - 1.0
215,976 + -0.9
216,104 - -0.7
216,216 - 0.3
216,296 + 0.2
216,375 - -0.3
216,378 + -0.4
216,423 + -0.8
216,429 - -0.2
216,579 + -0.7
216,673 + 13599 mRNA_5231 0.10 0.2
216,705 - 13599 mRNA_5231 0.12 -0.2
216,812 + 13599 mRNA_5231 0.19 -0.1