Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5167

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5166: 13534 - KOG0590 Checkpoint kinase and related serine/threonine protein kinases, at 53307 to 58220 13534 mRNA_5167: 13535 - Hypothetical Protein, at 58782 to 59470 13535

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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57,858 - -1.2
57,867 + 0.1
57,896 + 0.7
58,295 - -0.1
58,464 + 0.7
58,586 - 0.5
58,589 - 0.0
58,613 - 1.1
58,633 - -0.5
58,734 + -0.1
59,032 - 13535 mRNA_5167 0.36 -0.6
59,174 + 13535 mRNA_5167 0.57 -0.3
59,187 + 13535 mRNA_5167 0.59 0.7
59,189 + 13535 mRNA_5167 0.59 0.5
59,350 + 13535 mRNA_5167 0.82 1.6
59,461 + -2.2
59,493 - 0.2
59,495 - 0.3
59,647 - 0.7
59,656 - 0.2
59,658 - -0.0
59,687 - 0.6
59,691 - -0.3
59,723 - -1.1
59,794 - -0.1
59,803 - -0.0
59,955 - 0.7
60,199 - -0.1
60,240 + -1.0
60,250 - 0.4
60,289 + -0.1