Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5074

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5073: 13441 - K12843 PRPF3, PRP3 U4/U6 small nuclear ribonucleoprotein PRP3, at 1684335 to 1686538 13441 mRNA_5074: 13442 - KOG1426 FOG RCC1 domain, at 1686748 to 1688020 13442 mRNA_5075: 13443 - K00958 sat, met3 sulfate adenylyltransferase, at 1688216 to 1690274 13443

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,686,588 + -0.2
1,686,677 - 0.1
1,686,686 + -0.7
1,686,950 - 13442 mRNA_5074 0.16 -1.4
1,686,969 + 13442 mRNA_5074 0.17 0.1
1,687,136 + 13442 mRNA_5074 0.30 -0.0
1,687,137 - 13442 mRNA_5074 0.31 0.2
1,687,248 + 13442 mRNA_5074 0.39 0.1
1,687,408 + 13442 mRNA_5074 0.52 -0.1
1,687,682 + 13442 mRNA_5074 0.73 -0.7
1,687,906 - -1.0
1,688,152 + -0.1
1,688,275 - 0.2
1,688,697 - 13443 mRNA_5075 0.23 -0.5
1,688,703 + 13443 mRNA_5075 0.24 0.2
1,688,832 - 13443 mRNA_5075 0.30 -1.7
1,688,936 - 13443 mRNA_5075 0.35 -0.2