Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5046

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5045: 13413 - K01111 E3.1.3.68 2-deoxyglucose-6-phosphatase, at 1628554 to 1629804 13413 mRNA_5046: 13414 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 1630371 to 1631224 13414 mRNA_5047: 13415 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 1631648 to 1632435 13415

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,629,491 - 13413 mRNA_5045 0.75 -1.0
1,629,787 + -0.5
1,629,899 + 0.2
1,629,918 - 0.6
1,629,936 + 0.1
1,630,193 - -0.5
1,630,341 + -0.2
1,630,351 - 0.6
1,630,362 + -1.2
1,630,633 - 13414 mRNA_5046 0.31 -0.5
1,630,638 + 13414 mRNA_5046 0.31 0.1
1,630,738 - 13414 mRNA_5046 0.43 -0.5
1,630,776 - 13414 mRNA_5046 0.47 -1.4
1,631,040 - 13414 mRNA_5046 0.78 -0.8
1,631,048 + 13414 mRNA_5046 0.79 1.2
1,631,068 + 13414 mRNA_5046 0.82 0.5
1,631,155 - -0.5
1,631,174 - 0.1
1,631,204 - 1.4
1,631,495 + 0.0
1,631,603 + -0.4
1,631,903 + 13415 mRNA_5047 0.32 -0.2
1,632,007 - 13415 mRNA_5047 0.46 -0.5
1,632,217 - 13415 mRNA_5047 0.72 -1.6