Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4978

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4977: 13345 - Hypothetical Protein, at 1459156 to 1464394 13345 mRNA_4978: 13346 - K12883 NCBP2, CBP20 nuclear cap-binding protein subunit 2, at 1465278 to 1466176 13346 mRNA_4979: 13347 - K03575 mutY A/G-specific adenine glycosylase, at 1466290 to 1468594 13347

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,464,289 - 0.1
1,464,329 - -1.5
1,464,333 - -0.8
1,464,412 - -0.2
1,464,691 - -0.3
1,464,986 + 0.8
1,465,133 - 1.0
1,465,140 + 0.5
1,465,288 + -0.4
1,465,295 + -0.8
1,465,322 + 0.0
1,465,431 + 13346 mRNA_4978 0.17 -1.2
1,465,546 - 13346 mRNA_4978 0.30 -0.8
1,465,984 - 13346 mRNA_4978 0.79 1.2
1,465,995 + 13346 mRNA_4978 0.80 -0.2
1,466,005 + 13346 mRNA_4978 0.81 -0.8
1,466,151 + -0.5
1,466,568 - 13347 mRNA_4979 0.12 0.3
1,466,604 - 13347 mRNA_4979 0.14 0.6
1,466,605 + 13347 mRNA_4979 0.14 -0.0
1,467,168 + 13347 mRNA_4979 0.38 -0.1