Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4916

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4915: 13283 - HMMPfam-Complex1_LYR-like-PF13233, at 1297667 to 1298264 13283 mRNA_4916: 13284 - Hypothetical Protein, at 1298446 to 1299767 13284 mRNA_4917: 13285 - KOG2920 Predicted methyltransferase, at 1300079 to 1301093 13285

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,297,595 - 0.1
1,297,598 + 0.1
1,297,605 - -0.8
1,297,606 - 1.1
1,297,626 + 0.0
1,297,641 - -0.3
1,298,067 + 13283 mRNA_4915 0.67 0.5
1,298,329 - -1.1
1,298,332 - -0.3
1,298,341 + -0.0
1,298,353 - 0.3
1,298,914 + 13284 mRNA_4916 0.35 1.2
1,298,918 - 13284 mRNA_4916 0.36 0.7
1,298,921 - 13284 mRNA_4916 0.36 -0.1
1,299,258 + 13284 mRNA_4916 0.61 -1.1
1,299,386 + 13284 mRNA_4916 0.71 0.1
1,299,793 - -0.2
1,299,799 - 0.3
1,299,973 - -0.7
1,300,071 + 2.0
1,300,119 + -0.2
1,300,262 - 13285 mRNA_4917 0.18 0.8
1,300,696 + 13285 mRNA_4917 0.61 0.4