Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4914

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4913: 13281 - HMMPfam-Spermine/spermidine synthase-PF01564,ProSiteProfiles-Polyamine biosynthesis (PABS) domain profile.-PS51006,SUPERFAMILY--SSF53335, at 1291669 to 1293879 13281 mRNA_4914: 13282 - KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins, at 1294670 to 1297098 13282 mRNA_4915: 13283 - HMMPfam-Complex1_LYR-like-PF13233, at 1297667 to 1298264 13283

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,293,835 + 0.6
1,293,989 + -0.1
1,294,553 + 0.3
1,295,400 - 13282 mRNA_4914 0.30 0.3
1,296,411 - 13282 mRNA_4914 0.72 -0.5
1,296,881 + 1.6
1,296,896 + 0.4
1,297,122 - -0.8
1,297,313 - -1.0
1,297,333 + 0.7
1,297,337 + 0.5
1,297,350 - -0.1
1,297,595 - 0.1
1,297,598 + 0.1
1,297,605 - -0.8
1,297,606 - 1.1
1,297,626 + 0.0
1,297,641 - -0.3
1,298,067 + 13283 mRNA_4915 0.67 0.5