Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4854

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4853: 13221 - Hypothetical Protein, at 1153001 to 1154455 13221 mRNA_4854: 13222 - ProSiteProfiles-BTB domain profile.-PS50097, at 1155001 to 1156417 13222 mRNA_4855: 13223 - K02957 RP-S15Ae, RPS15A small subunit ribosomal protein S15Ae, at 1156892 to 1157465 13223

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,154,049 - 13221 mRNA_4853 0.72 -0.7
1,154,240 + 13221 mRNA_4853 0.85 0.5
1,154,364 - 0.1
1,154,364 - 0.0
1,154,884 - 0.2
1,154,885 + 0.1
1,155,080 - -1.0
1,155,556 + 13222 mRNA_4854 0.39 2.5
1,155,633 - 13222 mRNA_4854 0.45 0.2
1,155,674 - 13222 mRNA_4854 0.47 0.0
1,155,832 + 13222 mRNA_4854 0.59 0.6
1,155,941 - 13222 mRNA_4854 0.66 1.8
1,156,213 - 13222 mRNA_4854 0.86 -0.4
1,156,501 + -0.5
1,156,679 + -0.2
1,156,684 + -0.3
1,156,688 + -0.2
1,156,823 + 1.1