Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4829

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4828: 13196 - SUPERFAMILY--SSF52047, at 1102732 to 1104516 13196 mRNA_4829: 13197 - K01298 CPA2 carboxypeptidase A2, at 1104804 to 1106642 13197 mRNA_4830: 13198 - K03066 PSMC5, RPT6 26S proteasome regulatory subunit T6, at 1106842 to 1108313 13198

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,103,897 - 13196 mRNA_4828 0.65 -0.2
1,103,928 + 13196 mRNA_4828 0.67 0.3
1,104,032 - 13196 mRNA_4828 0.73 -0.2
1,104,039 + 13196 mRNA_4828 0.73 0.3
1,104,083 + 13196 mRNA_4828 0.76 0.0
1,104,354 - 0.8
1,104,366 - -0.4
1,104,516 - -0.6
1,104,680 - 0.9
1,104,825 + 0.4
1,105,345 - 13197 mRNA_4829 0.29 0.3
1,105,780 - 13197 mRNA_4829 0.53 -0.6
1,105,870 + 13197 mRNA_4829 0.58 0.6
1,105,978 - 13197 mRNA_4829 0.64 0.3
1,106,155 - 13197 mRNA_4829 0.73 0.2
1,106,398 - 13197 mRNA_4829 0.87 0.2
1,106,406 + 13197 mRNA_4829 0.87 0.1
1,106,532 - 0.2
1,106,542 - -0.0
1,106,544 - 0.5
1,106,551 - 1.1