Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4744

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4744: 13112 - HMMPfam-Uncharacterized alpha/beta hydrolase domain (DUF2235)-PF09994, at 906003 to 908213 13112 mRNA_4745: 13113 - K17086 TM9SF2_4 transmembrane 9 superfamily member 2/4, at 908739 to 911438 13113

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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905,131 + -1.4
905,212 - 0.5
905,451 + -1.1
905,468 - -0.2
905,469 - -0.4
905,627 - -1.0
905,631 + -0.6
905,631 - 0.6
905,748 + -1.1
905,794 + -0.1
905,801 + 0.4
905,851 - 0.1
905,856 - -0.6
905,865 + -0.3
905,869 - 0.8
905,870 - -0.2
905,883 - -0.3
905,896 - -0.6
905,903 - -1.3
905,917 + 0.2
905,922 - -0.4
905,930 + 1.3
905,949 - -0.7
905,951 + 1.0
905,964 - -1.0
905,964 + -0.5
905,965 + -0.5
905,966 - -1.3
905,970 - -0.6
905,978 - 2.3
906,149 - 1.2
906,228 - 13112 mRNA_4744 0.10 -0.2
906,234 + 13112 mRNA_4744 0.10 -0.1
906,366 - 13112 mRNA_4744 0.16 0.5
906,541 + 13112 mRNA_4744 0.24 0.0
906,577 + 13112 mRNA_4744 0.26 -2.7
906,654 - 13112 mRNA_4744 0.29 0.3
906,972 + 13112 mRNA_4744 0.44 -0.7
907,275 + 13112 mRNA_4744 0.58 1.4
907,296 - 13112 mRNA_4744 0.58 0.0
907,439 - 13112 mRNA_4744 0.65 0.7
907,514 + 13112 mRNA_4744 0.68 -0.8
907,735 + 13112 mRNA_4744 0.78 -1.1
907,773 - 13112 mRNA_4744 0.80 -0.7
907,807 - 13112 mRNA_4744 0.82 -1.5
907,816 + 13112 mRNA_4744 0.82 -0.3
907,949 + 13112 mRNA_4744 0.88 0.2
908,191 - 1.5
908,288 + -0.1
908,444 + 0.3
908,605 + 2.5
908,674 + 0.2
908,682 - -0.3
908,827 + -0.7
908,963 + 1.9
909,068 + 13113 mRNA_4745 0.12 1.0
909,151 - 13113 mRNA_4745 0.15 -0.1