Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4733

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4732: 13100 - HMMPfam-Major intrinsic protein-PF00230,PRINTS-Major intrinsic protein family signature-PR00783,SUPERFAMILY--SSF81338, at 879432 to 880805 13100 mRNA_4733: 13101 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 881363 to 882284 13101 mRNA_4734: 13102 - Hypothetical Protein, at 883185 to 884845 13102

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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880,467 - 13100 mRNA_4732 0.75 -0.9
880,817 - 1.4
881,044 - 1.0
881,045 + 0.5
881,048 + -1.6
881,086 - -0.6
881,159 - -0.3
881,164 - -0.3
881,171 - -0.3
881,184 + -0.0
881,185 + -0.5
881,225 + 0.1
881,243 + -1.2
881,257 - 1.7
881,293 - -1.2
881,428 + 0.1
881,506 - 13101 mRNA_4733 0.16 0.3
881,525 - 13101 mRNA_4733 0.18 -0.5
881,791 - 13101 mRNA_4733 0.46 0.6
881,918 - 13101 mRNA_4733 0.60 1.6
882,134 + 13101 mRNA_4733 0.84 1.8
882,358 - 0.2
882,366 - 0.1
882,384 - 3.1
882,385 + 0.9
882,413 - 0.0
882,645 - -1.1
882,823 - -0.1
882,826 + -0.4
882,829 - -0.5
882,829 + 0.2
882,833 + 0.3
882,833 + 0.1
882,837 - -0.7
882,842 + -0.3
882,843 + 0.7
882,846 + -0.1
882,846 - 0.3
882,848 + -1.4
882,923 - -0.8
882,967 + 1.0
882,987 + 0.3
883,014 + -1.5
883,111 - 0.5
883,121 + -0.8
883,122 + -0.1
883,125 + -0.3
883,125 - 0.2
883,126 - 1.0
883,130 + 0.3