Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4722

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4721: 13089 - K10643 CNOT4, NOT4, MOT2 CCR4-NOT transcription complex subunit 4, at 854665 to 858103 13089 mRNA_4722: 13090 - K01027 OXCT 3-oxoacid CoA-transferase, at 858449 to 860854 13090 mRNA_4723: 13091 - Hypothetical Protein, at 861099 to 862312 13091

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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857,781 + 0.0
858,337 + -0.2
858,513 - -1.2
858,848 + 13090 mRNA_4722 0.17 0.4
858,979 - 13090 mRNA_4722 0.22 0.4
858,990 + 13090 mRNA_4722 0.22 -0.1
859,010 - 13090 mRNA_4722 0.23 0.1
859,140 - 13090 mRNA_4722 0.29 -0.9
859,592 + 13090 mRNA_4722 0.48 0.5
859,754 - 13090 mRNA_4722 0.54 0.5
859,875 - 13090 mRNA_4722 0.59 -1.3
859,963 + 13090 mRNA_4722 0.63 -2.0
859,966 - 13090 mRNA_4722 0.63 -1.3
860,007 + 13090 mRNA_4722 0.65 -0.5
860,024 + 13090 mRNA_4722 0.65 -0.2
860,167 - 13090 mRNA_4722 0.71 -0.2
860,307 - 13090 mRNA_4722 0.77 0.1
860,307 - 13090 mRNA_4722 0.77 -0.8
860,617 - 1.2
860,722 - -1.3
860,739 - -0.3
860,753 + 0.4
860,756 - 1.8
860,764 + 0.2
860,784 - 0.8
860,903 + 0.5
860,913 + -0.8
860,917 - 1.5
860,917 + -1.0
860,922 - 0.5
860,925 + 0.4
860,947 + 0.5
861,499 + 13091 mRNA_4723 0.33 -0.3