Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4663

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4662: 13030 - K20352 TMED10, ERV25 p24 family protein delta-1, at 720674 to 721650 13030 mRNA_4663: 13031 - K18619 CORO7 coronin-7, at 722374 to 726218 13031 mRNA_4664: 13032 - Hypothetical Protein, at 726545 to 727733 13032

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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721,562 - -0.9
721,600 - 0.3
721,907 + 0.2
722,039 + 0.2
722,039 - 1.1
722,180 - 0.3
722,182 - -0.2
722,217 - -1.9
722,314 - -0.4
722,631 + -1.0
722,929 + 13031 mRNA_4663 0.14 0.8
723,475 + 13031 mRNA_4663 0.29 0.7
723,790 - 13031 mRNA_4663 0.37 0.5
724,254 + 13031 mRNA_4663 0.49 -1.0
724,334 + 13031 mRNA_4663 0.51 0.8
724,407 - 13031 mRNA_4663 0.53 -0.3
724,787 + 13031 mRNA_4663 0.63 -0.8
725,032 + 13031 mRNA_4663 0.69 0.7
725,383 + 13031 mRNA_4663 0.78 -1.3
726,504 + -1.3
726,557 + -0.7
726,827 - 13032 mRNA_4664 0.24 0.3
726,850 - 13032 mRNA_4664 0.26 0.0
726,874 + 13032 mRNA_4664 0.28 0.0