Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4645

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4644: 13012 - Hypothetical Protein, at 679484 to 680110 13012 mRNA_4645: 13013 - Hypothetical Protein, at 680533 to 681409 13013 mRNA_4646: 13014 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 681473 to 684221 13014

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
679,892 - 13012 mRNA_4644 0.65 0.2
679,921 - 13012 mRNA_4644 0.70 0.1
680,042 - 13012 mRNA_4644 0.89 0.4
680,176 - 0.1
680,199 - 0.8
680,221 - 0.4
680,225 + -0.3
680,227 - -1.0
680,233 + 0.2
680,258 - -0.1
680,349 + -2.0
680,351 - 0.3
680,363 - -2.0
680,366 + 0.2
680,368 + 0.1
680,369 - -1.1
680,376 + 1.6
680,418 + 0.0
680,544 + 0.1
680,551 + -0.8
680,571 - 1.9
680,625 + 13013 mRNA_4645 0.10 -1.2
681,257 + 13013 mRNA_4645 0.83 0.1
681,850 + 13014 mRNA_4646 0.14 0.8
681,994 - 13014 mRNA_4646 0.19 0.9
682,137 + 13014 mRNA_4646 0.24 -1.0
682,163 - 13014 mRNA_4646 0.25 -0.0
682,167 + 13014 mRNA_4646 0.25 -0.5
682,291 - 13014 mRNA_4646 0.30 -0.1
682,398 - 13014 mRNA_4646 0.34 0.2