Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4629

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4628: 12996 - KOG0253 Synaptic vesicle transporter SV2 (major facilitator superfamily), at 639260 to 641629 12996 mRNA_4629: 12997 - K11971 RNF14, ARA54 E3 ubiquitin-protein ligase RNF14, at 642577 to 644729 12997

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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641,651 - -0.4
641,744 - -0.2
642,048 - -0.6
642,138 + 1.1
642,353 - -0.1
642,625 + -0.3
643,223 - 12997 mRNA_4629 0.30 0.0
643,349 - 12997 mRNA_4629 0.36 0.4
643,361 + 12997 mRNA_4629 0.36 -0.7
643,367 - 12997 mRNA_4629 0.37 -0.9
643,492 - 12997 mRNA_4629 0.42 -2.0
644,352 - 12997 mRNA_4629 0.82 -1.0
644,513 + 12997 mRNA_4629 0.90 -1.0
644,654 - -0.2
644,655 - 0.5
644,671 - 0.2
644,675 - 0.0
644,675 - 0.2
644,676 + 0.4
644,800 - 0.2
644,825 - -0.8
644,833 - -1.6
644,879 + 2.0
644,949 - 0.3
645,710 - -1.0