Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4624

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4623: 12991 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 625237 to 628203 12991 mRNA_4624: 12992 - Hypothetical Protein, at 628501 to 629051 12992 mRNA_4625: 12993 - K09660 MPDU1 mannose-P-dolichol utilization defect 1, at 629352 to 630709 12993

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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628,098 + 0.5
628,566 + 12992 mRNA_4624 0.12 -0.2
628,844 + 12992 mRNA_4624 0.62 -0.1
629,233 - -0.6
629,248 + 0.5
629,258 - -0.2
629,269 - -0.3
629,273 + 1.2
629,409 + -0.3
629,413 + 0.5
629,684 + 12993 mRNA_4625 0.24 -1.0
629,823 - 12993 mRNA_4625 0.35 -0.3