Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4505

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4504: 12872 - Hypothetical Protein, at 338393 to 338917 12872 mRNA_4505: 12873 - K18172 CMC2 COX assembly mitochondrial protein 2, at 338981 to 339395 12873 mRNA_4506: 12874 - KOG4754 Predicted phosphoglycerate mutase, at 339394 to 340797 12874

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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338,090 - 0.4
338,237 - 0.9
338,243 - -1.0
338,248 + -0.3
338,279 + -1.3
338,400 - 0.9
338,402 - -0.2
338,412 + -0.3
338,422 + -0.7
338,682 + 12872 mRNA_4504 0.55 1.8
338,699 + 12872 mRNA_4504 0.58 -0.6
338,699 + 12872 mRNA_4504 0.58 1.2
339,130 - 12873 mRNA_4505 0.36 0.1
339,137 - 12873 mRNA_4505 0.38 -0.1
339,142 + 12873 mRNA_4505 0.39 -0.0
339,154 - 12873 mRNA_4505 0.42 -0.3
339,261 - 12873 mRNA_4505 0.67 0.0
339,274 + 12873 mRNA_4505 0.71 -0.1
339,279 - 12873 mRNA_4505 0.72 2.3
339,421 + 0.8
339,446 - -0.2
339,465 + 0.3
339,579 - 12874 mRNA_4506 0.13 -1.0
339,732 + 12874 mRNA_4506 0.24 -0.7
339,887 + 12874 mRNA_4506 0.35 -1.7
340,011 + 12874 mRNA_4506 0.44 -0.7
340,045 + 12874 mRNA_4506 0.46 -2.7
340,149 - 12874 mRNA_4506 0.54 0.1
340,205 - 12874 mRNA_4506 0.58 0.3