Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4437

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4436: 12804 - Hypothetical Protein, at 178306 to 178939 12804 mRNA_4437: 12805 - KOG4629 Predicted mechanosensitive ion channel, at 179176 to 181994 12805 mRNA_4438: 12806 - Hypothetical Protein, at 182518 to 183149 12806

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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178,180 - -0.7
178,275 + 0.2
178,278 - -0.3
178,309 - -0.3
178,315 - 1.1
178,320 - -0.0
178,320 - 0.8
178,322 + 0.1
178,324 + 0.1
178,335 + -0.1
178,341 + -0.5
178,347 + 0.2
178,358 - -0.5
178,381 - 12804 mRNA_4436 0.12 -0.8
178,385 - 12804 mRNA_4436 0.12 1.2
178,488 + 12804 mRNA_4436 0.29 -0.6
178,622 - 12804 mRNA_4436 0.50 -0.4
178,627 + 12804 mRNA_4436 0.51 0.4
178,736 + 12804 mRNA_4436 0.68 1.7
178,820 + 12804 mRNA_4436 0.81 1.7
178,867 + 12804 mRNA_4436 0.88 -1.4
178,884 + 1.4
178,885 - -2.2
178,939 - 0.4
179,029 - -0.0
179,032 - -0.4
179,033 + -0.6
179,039 + 0.1
179,039 + 0.0
179,078 - -1.2
179,226 - -0.3
179,233 + -0.4
179,255 + 1.2
179,707 - 12805 mRNA_4437 0.19 0.2
179,793 + 12805 mRNA_4437 0.22 0.4
179,910 + 12805 mRNA_4437 0.26 -0.6
179,959 + 12805 mRNA_4437 0.28 -0.0
179,988 - 12805 mRNA_4437 0.29 -0.5
180,064 + 12805 mRNA_4437 0.32 -0.8
180,107 + 12805 mRNA_4437 0.33 -0.6
180,210 - 12805 mRNA_4437 0.37 -0.8
180,480 - 12805 mRNA_4437 0.46 -0.7
180,542 - 12805 mRNA_4437 0.48 0.4
180,553 - 12805 mRNA_4437 0.49 -0.4
180,673 - 12805 mRNA_4437 0.53 0.5
180,922 - 12805 mRNA_4437 0.62 0.3
181,265 + 12805 mRNA_4437 0.74 -1.7
181,306 - 12805 mRNA_4437 0.76 -0.5
181,412 + 12805 mRNA_4437 0.79 0.7
181,660 - 12805 mRNA_4437 0.88 -0.3
182,260 + 0.9
182,277 + 1.6
182,427 - 1.4
182,439 - -0.1
182,459 + 0.2
182,492 + -1.2
182,519 + 2.2
182,534 + -0.2
182,594 + 12806 mRNA_4438 0.12 0.4
182,610 + 12806 mRNA_4438 0.15 0.0
182,754 + 12806 mRNA_4438 0.37 0.0
182,770 - 12806 mRNA_4438 0.40 0.9
182,892 + 12806 mRNA_4438 0.59 -0.0