Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4392

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4391: 12759 - Hypothetical Protein, at 79565 to 80188 12759 mRNA_4392: 12760 - KOG3069 Peroxisomal NUDIX hydrolase, at 80185 to 81389 12760 mRNA_4393: 12761 - K00029 E1.1.1.40, maeB malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+), at 82282 to 84844 12761

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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79,368 + 0.2
79,638 - 12759 mRNA_4391 0.12 0.6
79,725 - 12759 mRNA_4391 0.26 0.1
79,792 + 12759 mRNA_4391 0.36 1.6
80,034 + 12759 mRNA_4391 0.75 -0.4
80,318 + 12760 mRNA_4392 0.11 0.1
80,617 - 12760 mRNA_4392 0.36 0.6
81,192 + 12760 mRNA_4392 0.84 -2.1
81,203 - 12760 mRNA_4392 0.84 0.2
81,342 - 1.0
81,354 - 1.5
81,367 + -1.0
81,483 + -1.2
81,504 + 1.7
81,516 + 0.2
81,524 + 0.8
81,542 - 1.4
81,646 - 0.5
81,650 - 0.0
81,655 + 0.7
81,658 - -0.2
81,661 + 0.5
81,674 - 0.6
81,699 - 0.8
81,701 - -0.6
81,701 - 0.9
81,706 + 0.0
81,709 - 0.1
81,709 - 0.7
81,710 + -0.6
81,710 + -0.0
81,716 + 0.2
81,716 + -0.3
81,727 - -1.1
81,741 + -0.2
81,759 + -0.2
81,760 - 0.6
81,760 - 0.8
81,761 - -1.8
81,762 - -0.2
81,769 - 0.9
81,773 - -0.4
81,778 - 0.2
81,784 + -2.1
81,795 - 0.4
81,849 + 0.3
81,869 + 0.2
81,886 - -0.2
81,896 - 0.3
81,898 + -0.2
81,900 - -0.6
81,911 - -0.0
81,913 - -0.2
81,924 + -0.4
81,929 + -0.2
82,077 + -0.7
82,079 + 1.9
82,079 + -1.9
82,087 + 1.0
82,096 + -1.7
82,236 - 0.6
82,243 - -0.2
82,380 - 0.8