Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4261

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4260: 12628 - K11849 USP25_28, UBP2 ubiquitin carboxyl-terminal hydrolase 25/28, at 1731914 to 1736985 12628 mRNA_4261: 12629 - HMMPfam-NUDIX domain-PF00293,ProSitePatterns-Nudix box signature.-PS00893,ProSiteProfiles-Nudix hydrolase domain profile.-PS51462,SUPERFAMILY--SSF55811, at 1737818 to 1738734 12629 mRNA_4262: 12630 - KOG2688 Transcription-associated recombination protein - Thp1p, at 1738900 to 1741067 12630

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
1,737,047 + -0.4
1,737,194 - 0.1
1,737,205 + 1.5
1,737,214 + -0.5
1,737,345 - -0.0
1,737,381 - -1.4
1,737,456 - 0.7
1,737,500 - 1.4
1,737,503 + 0.8
1,737,519 + 0.4
1,737,688 - -0.5
1,738,088 - 12629 mRNA_4261 0.29 -0.3
1,738,411 + 12629 mRNA_4261 0.65 0.4
1,738,584 + 12629 mRNA_4261 0.84 -1.3
1,738,666 - 0.2
1,738,686 + 0.1
1,738,720 - -2.0
1,738,805 + 0.3
1,738,821 - 0.2
1,738,828 + -0.4
1,738,994 - 1.0
1,738,995 + -0.4
1,738,995 - 0.3
1,739,241 + 12630 mRNA_4262 0.16 0.7