Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4249

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4248: 12616 - K17764 MMM1 maintenance of mitochondrial morphology protein 1, at 1706710 to 1708657 12616 mRNA_4249: 12617 - K10436 MAPRE microtubule-associated protein, RP/EB family, at 1709275 to 1710811 12617 mRNA_4250: 12618 - K08956 AFG3 AFG3 family protein, at 1711024 to 1714296 12618

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,708,646 - -0.2
1,708,647 + 0.2
1,708,816 - 0.9
1,708,837 + -0.3
1,709,005 - 0.6
1,709,383 + 1.7
1,709,820 + 12617 mRNA_4249 0.35 0.3
1,709,950 + 12617 mRNA_4249 0.44 0.3
1,709,982 + 12617 mRNA_4249 0.46 0.6
1,710,279 + 12617 mRNA_4249 0.65 0.3
1,710,537 + 12617 mRNA_4249 0.82 0.2
1,710,675 + 1.3
1,710,682 - 0.2
1,710,683 + 0.0
1,710,698 + -0.1
1,710,709 + 0.2
1,710,711 + 0.4
1,710,814 - 1.5
1,710,825 + 0.6
1,710,830 + -2.1
1,710,924 + -0.2
1,710,953 - -0.3
1,710,960 + 1.3