Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4244

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4243: 12611 - HMMPfam-F-box-like-PF12937, at 1698723 to 1700079 12611 mRNA_4244: 12612 - Hypothetical Protein, at 1700194 to 1701109 12612 mRNA_4245: 12613 - Hypothetical Protein, at 1701205 to 1702275 12613

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,699,257 + 12611 mRNA_4243 0.39 0.2
1,699,285 - 12611 mRNA_4243 0.41 0.2
1,699,440 - 12611 mRNA_4243 0.53 0.8
1,699,551 - 12611 mRNA_4243 0.61 1.0
1,700,114 + -1.1
1,700,131 + 0.6
1,700,154 + -0.0
1,700,407 + 12612 mRNA_4244 0.23 -0.5
1,700,527 - 12612 mRNA_4244 0.36 -0.4
1,700,549 - 12612 mRNA_4244 0.39 1.3
1,700,565 + 12612 mRNA_4244 0.41 -0.6
1,700,588 - 12612 mRNA_4244 0.43 0.3
1,700,733 + 12612 mRNA_4244 0.59 1.1
1,700,860 + 12612 mRNA_4244 0.73 0.7
1,701,147 + 1.0
1,701,175 + -0.4
1,701,276 + 1.1
1,701,438 - 12613 mRNA_4245 0.22 0.2
1,701,540 - 12613 mRNA_4245 0.31 0.4
1,701,562 - 12613 mRNA_4245 0.33 0.6
1,701,753 - 12613 mRNA_4245 0.51 -0.1
1,701,954 - 12613 mRNA_4245 0.70 -0.4
1,702,007 + 12613 mRNA_4245 0.75 -0.2
1,702,060 - 12613 mRNA_4245 0.80 -0.1