Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4155

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4154: 12522 - K17402 MRPS23 small subunit ribosomal protein S23, at 1482956 to 1484034 12522 mRNA_4155: 12523 - K12492 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1, at 1484305 to 1486151 12523 mRNA_4156: 12524 - KOG1242 Protein containing adaptin N-terminal region, at 1486313 to 1494426 12524

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,484,065 - 0.6
1,484,104 + -0.3
1,484,123 + 0.4
1,484,127 - -0.1
1,484,224 - -0.7
1,484,234 - 1.4
1,484,234 - -0.7
1,484,238 - -0.2
1,484,847 + 12523 mRNA_4155 0.29 0.0
1,484,974 - 12523 mRNA_4155 0.36 -0.4
1,485,133 - 12523 mRNA_4155 0.45 0.4
1,485,258 - 12523 mRNA_4155 0.52 0.3
1,485,518 - 12523 mRNA_4155 0.66 -0.7
1,485,735 + 12523 mRNA_4155 0.77 -0.8
1,486,134 + -0.2
1,486,184 + 0.2
1,486,313 - 0.9
1,486,321 - 1.0
1,486,878 - -0.2