Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4146

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4145: 12513 - K00641 metX homoserine O-acetyltransferase, at 1460929 to 1462648 12513 mRNA_4146: 12514 - Hypothetical Protein, at 1463545 to 1465730 12514 mRNA_4147: 12515 - HMMPfam-NAD(P)-binding Rossmann-like domain-PF13450,PRINTS-Adrenodoxin reductase family signature-PR00419,SUPERFAMILY--SSF51905, at 1466174 to 1468597 12515

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,462,563 + -0.3
1,462,568 - -0.3
1,462,693 - -0.7
1,462,696 - -0.2
1,462,722 - -0.7
1,462,737 - 1.9
1,462,820 - -0.4
1,462,849 + -0.8
1,462,894 + -1.0
1,462,984 - 0.2
1,463,152 - -0.3
1,463,592 + 0.8
1,464,320 - 12514 mRNA_4146 0.35 -0.3
1,464,728 - 12514 mRNA_4146 0.54 2.0
1,464,762 + 12514 mRNA_4146 0.56 0.2
1,464,912 - 12514 mRNA_4146 0.63 -0.1
1,465,196 - 12514 mRNA_4146 0.76 -0.5
1,465,222 - 12514 mRNA_4146 0.77 -0.2
1,465,252 - 12514 mRNA_4146 0.78 0.8
1,465,764 + -0.3
1,465,789 - 0.0
1,465,833 + 1.4
1,465,846 + -0.2
1,465,855 - -0.2
1,465,857 - -0.1
1,465,861 + -0.9
1,465,866 + 1.6
1,465,869 + -0.8
1,465,871 + 0.4
1,465,871 + 0.2
1,465,875 + 0.3
1,465,904 - 0.7
1,465,904 + 0.6
1,465,906 - 1.1
1,465,923 + -0.5
1,466,085 - 0.4
1,466,331 - 0.3
1,466,620 - 12515 mRNA_4147 0.18 -0.5
1,466,653 - 12515 mRNA_4147 0.20 0.4