Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4133

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4133: 12501 - Hypothetical Protein, at 1428021 to 1428981 12501 mRNA_4134: 12502 - Hypothetical Protein, at 1429652 to 1434767 12502

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,427,037 + -0.1
1,427,297 - 0.3
1,427,459 - -1.0
1,427,583 + -0.4
1,427,590 - 0.7
1,427,609 - 1.9
1,427,609 - 0.1
1,427,732 - -0.5
1,427,758 + 1.0
1,427,880 - -0.1
1,427,888 + 1.1
1,427,890 + 0.1
1,427,890 + -0.6
1,427,895 - -0.1
1,427,898 + 2.3
1,427,898 - 0.2
1,427,898 - 0.7
1,427,907 - -0.3
1,427,907 - 0.3
1,427,910 - -0.7
1,427,910 + 0.2
1,427,911 + 0.6
1,427,911 + -0.9
1,427,911 - 1.0
1,427,911 - 0.4
1,427,912 - -0.5
1,427,912 + -0.7
1,427,914 + 0.1
1,427,916 + 1.8
1,427,927 + 0.3
1,427,928 + -0.3
1,427,929 + -1.2
1,427,931 + 0.3
1,427,932 + -0.2
1,427,936 + -0.1
1,427,942 - -0.6
1,427,952 + 0.0
1,427,953 - 0.1
1,427,981 + -0.2
1,428,177 + 12501 mRNA_4133 0.16 0.2
1,428,223 - 12501 mRNA_4133 0.21 1.0
1,428,226 + 12501 mRNA_4133 0.21 0.2
1,428,238 - 12501 mRNA_4133 0.23 -0.1
1,428,246 - 12501 mRNA_4133 0.23 0.3
1,428,246 - 12501 mRNA_4133 0.23 0.3
1,428,248 - 12501 mRNA_4133 0.24 0.4
1,428,249 + 12501 mRNA_4133 0.24 0.7
1,428,260 - 12501 mRNA_4133 0.25 -0.7
1,428,261 - 12501 mRNA_4133 0.25 0.1
1,428,283 - 12501 mRNA_4133 0.27 -0.3
1,428,284 + 12501 mRNA_4133 0.27 -1.0
1,428,292 - 12501 mRNA_4133 0.28 -0.1
1,428,295 + 12501 mRNA_4133 0.29 -0.4
1,428,295 - 12501 mRNA_4133 0.29 0.6
1,428,295 - 12501 mRNA_4133 0.29 0.3
1,428,295 - 12501 mRNA_4133 0.29 -0.2
1,428,297 - 12501 mRNA_4133 0.29 0.1
1,428,297 - 12501 mRNA_4133 0.29 -0.2
1,428,297 - 12501 mRNA_4133 0.29 -0.2
1,428,298 + 12501 mRNA_4133 0.29 0.4
1,428,298 + 12501 mRNA_4133 0.29 1.7
1,428,298 + 12501 mRNA_4133 0.29 0.1
1,428,300 - 12501 mRNA_4133 0.29 0.3
1,428,300 - 12501 mRNA_4133 0.29 0.5
1,428,300 - 12501 mRNA_4133 0.29 -0.9
1,428,301 + 12501 mRNA_4133 0.29 -0.2
1,428,302 - 12501 mRNA_4133 0.29 -0.6
1,428,303 + 12501 mRNA_4133 0.29 0.6
1,428,304 + 12501 mRNA_4133 0.29 -1.5
1,428,309 - 12501 mRNA_4133 0.30 0.5
1,428,310 + 12501 mRNA_4133 0.30 1.9
1,428,310 - 12501 mRNA_4133 0.30 0.1
1,428,314 + 12501 mRNA_4133 0.30 0.3
1,428,320 - 12501 mRNA_4133 0.31 0.5
1,428,334 - 12501 mRNA_4133 0.33 -0.4
1,428,340 - 12501 mRNA_4133 0.33 -0.5
1,428,346 - 12501 mRNA_4133 0.34 -0.1
1,428,353 - 12501 mRNA_4133 0.35 -2.8
1,428,365 - 12501 mRNA_4133 0.36 0.3
1,428,370 + 12501 mRNA_4133 0.36 -0.3
1,428,410 - 12501 mRNA_4133 0.40 -0.2
1,428,473 - 12501 mRNA_4133 0.47 -0.4
1,428,481 - 12501 mRNA_4133 0.48 0.0
1,428,500 - 12501 mRNA_4133 0.50 0.6
1,428,504 - 12501 mRNA_4133 0.50 0.4
1,428,507 - 12501 mRNA_4133 0.51 0.1
1,428,520 + 12501 mRNA_4133 0.52 1.4
1,428,522 - 12501 mRNA_4133 0.52 -0.3
1,428,536 - 12501 mRNA_4133 0.54 1.1
1,428,655 - 12501 mRNA_4133 0.66 -0.3
1,428,655 - 12501 mRNA_4133 0.66 -0.2
1,428,664 + 12501 mRNA_4133 0.67 0.5
1,428,664 - 12501 mRNA_4133 0.67 -0.0
1,428,672 + 12501 mRNA_4133 0.68 -0.1
1,428,680 - 12501 mRNA_4133 0.69 -0.2
1,428,685 + 12501 mRNA_4133 0.69 0.7
1,428,688 + 12501 mRNA_4133 0.69 -0.1
1,428,693 - 12501 mRNA_4133 0.70 -0.6
1,428,696 + 12501 mRNA_4133 0.70 0.6
1,428,710 + 12501 mRNA_4133 0.72 1.1
1,428,963 - 0.5
1,428,983 + -0.2
1,429,118 - 0.2
1,429,132 + -0.7
1,429,292 - 0.4
1,429,429 - -0.3