Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4092

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4091: 12459 - K03362 FBXW1_11, BTRC, beta-TRCP F-box and WD-40 domain protein 1/11, at 1334109 to 1336957 12459 mRNA_4092: 12460 - KOG0941 E3 ubiquitin protein ligase, at 1337124 to 1338710 12460 mRNA_4093: 12461 - Hypothetical Protein, at 1338946 to 1342318 12461

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,336,178 - 12459 mRNA_4091 0.73 -0.3
1,336,778 - -0.1
1,336,874 + -0.2
1,336,877 + 0.9
1,337,036 - 2.0
1,337,046 + -0.3
1,337,063 - 1.1
1,337,066 + 0.1
1,337,072 + 1.2
1,337,196 + 0.8
1,337,228 + 0.3
1,337,933 - 12460 mRNA_4092 0.51 -2.3
1,338,515 + 12460 mRNA_4092 0.88 1.0
1,338,653 - 0.1
1,338,788 + 0.4
1,339,497 + 12461 mRNA_4093 0.16 0.2