Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4054

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4053: 12421 - K00602 purH phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase, at 1245651 to 1248069 12421 mRNA_4054: 12422 - KOG2973 Uncharacterized conserved protein, at 1248233 to 1250054 12422 mRNA_4055: 12423 - HMMPfam-Glyoxalase-like domain-PF12681,SUPERFAMILY--SSF54593, at 1250163 to 1250733 12423 mRNA_4056: 12424 - BLAST tRNA(His) guanylyltransferase [Kwoniella heveanensis ..., at 1250945 to 1252332 12424

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
1,248,143 - 0.2
1,248,152 + 0.6
1,248,152 + 0.5
1,248,153 - 0.8
1,248,157 - -1.1
1,248,164 + -0.5
1,248,171 - 1.4
1,248,171 + 0.4
1,248,190 + 1.6
1,248,279 - -0.4
1,248,342 + 1.2
1,248,445 + 12422 mRNA_4054 0.12 -1.2
1,248,631 + 12422 mRNA_4054 0.22 -0.7
1,250,276 + 12423 mRNA_4055 0.20 -0.3
1,250,320 - 12423 mRNA_4055 0.27 -0.1
1,250,594 - 12423 mRNA_4055 0.75 -1.8
1,250,622 + 12423 mRNA_4055 0.80 -0.3
1,250,623 - 12423 mRNA_4055 0.81 0.7
1,250,623 - 12423 mRNA_4055 0.81 -0.3
1,250,895 - -0.9
1,250,898 - -0.2
1,250,898 + -1.8
1,251,039 - -0.1
1,251,047 - 0.3
1,251,054 + -0.5