Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4016

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4015: 12383 - K04512 DAAM dishevelled associated activator of morphogenesis, at 1159964 to 1166346 12383 mRNA_4016: 12384 - K01250 rihA pyrimidine-specific ribonucleoside hydrolase, at 1166386 to 1167803 12384 mRNA_4017: 12385 - K13333 PLB lysophospholipase, at 1168260 to 1170390 12385

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
1,165,407 + 12383 mRNA_4015 0.85 -0.2
1,165,686 + 12383 mRNA_4015 0.90 0.5
1,166,114 - -0.2
1,166,212 + 1.6
1,166,657 + 12384 mRNA_4016 0.19 0.1
1,166,685 - 12384 mRNA_4016 0.21 1.4
1,166,706 + 12384 mRNA_4016 0.23 0.9
1,166,859 + 12384 mRNA_4016 0.33 0.1
1,166,920 + 12384 mRNA_4016 0.38 -0.3
1,166,991 + 12384 mRNA_4016 0.43 0.0
1,167,118 + 12384 mRNA_4016 0.52 0.0
1,167,577 - 12384 mRNA_4016 0.84 0.9
1,167,720 - 0.1
1,167,752 - -0.1
1,167,871 - -0.7
1,167,918 - -1.0
1,167,972 - 1.1
1,168,013 - 0.3
1,168,036 - -1.0
1,168,186 - -0.2
1,168,193 - -0.1
1,168,198 - -0.7
1,168,329 - 0.6
1,168,331 - -0.9
1,168,467 - 0.2
1,168,494 + 12385 mRNA_4017 0.11 -0.5
1,168,518 + 12385 mRNA_4017 0.12 -0.6
1,168,639 - 12385 mRNA_4017 0.18 -0.3
1,168,665 - 12385 mRNA_4017 0.19 -0.2
1,168,737 - 12385 mRNA_4017 0.22 0.1