Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3906

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3906: 12274 - K03495 gidA, mnmG, MTO1 tRNA uridine 5-carboxymethylaminomethyl modification enzyme, at 865746 to 868815 12274 mRNA_3907: 12275 - Hypothetical Protein, at 869074 to 869751 12275

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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864,761 - 0.3
864,870 - 0.2
864,921 - 0.3
865,062 - 0.1
865,069 + 0.2
865,221 - 0.2
865,230 + -0.1
865,362 + -0.2
865,363 - -0.5
865,382 - -0.1
865,392 + -0.9
865,503 - 1.1
865,505 + -1.4
865,517 + -0.4
865,525 + -2.3
865,526 - -0.4
865,695 - 0.1
866,320 - 12274 mRNA_3906 0.19 -1.4
866,400 - 12274 mRNA_3906 0.21 -1.1
866,668 + 12274 mRNA_3906 0.30 0.8
867,124 + 12274 mRNA_3906 0.45 1.3
867,664 + 12274 mRNA_3906 0.62 -0.6
867,832 + 12274 mRNA_3906 0.68 1.8
868,276 + 12274 mRNA_3906 0.82 0.2
868,299 - 12274 mRNA_3906 0.83 -0.5
868,418 - 12274 mRNA_3906 0.87 -0.1
868,555 + -0.2
868,690 - 0.7
868,702 + 0.1
868,878 + -0.1
869,005 - -0.0
869,017 + 0.1
869,164 - 12275 mRNA_3907 0.13 -0.3
869,182 + 12275 mRNA_3907 0.16 2.3
869,184 - 12275 mRNA_3907 0.16 0.5
869,782 + -0.4