Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3895

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3894: 12262 - SUPERFAMILY--SSF54695, at 842449 to 843578 12262 mRNA_3895: 12263 - Hypothetical Protein, at 844130 to 844681 12263 mRNA_3896: 12264 - BLAST F-box domain containing protein [Metarhizium maju..., at 844807 to 845932 12264

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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843,200 - 12262 mRNA_3894 0.66 0.5
843,417 - 12262 mRNA_3894 0.86 1.0
843,474 + 0.6
843,479 - 0.4
843,481 + -0.3
843,481 + -0.8
843,606 - -0.8
843,621 - 0.2
843,623 - 0.2
843,627 + -0.8
843,647 - -0.2
843,723 - 0.6
843,747 - 1.6
843,757 - 0.2
843,908 - -0.6
843,941 + 0.4
844,047 - -0.8
844,055 - 0.6
844,056 + -0.1
844,071 + -0.3
844,143 + -0.2
844,198 + 12263 mRNA_3895 0.12 1.0
844,332 - 12263 mRNA_3895 0.37 0.7
844,340 + 12263 mRNA_3895 0.38 0.8
844,365 - 12263 mRNA_3895 0.43 -0.2
844,370 - 12263 mRNA_3895 0.43 -0.5
844,371 + 12263 mRNA_3895 0.44 -1.1
844,385 + 12263 mRNA_3895 0.46 0.2
844,392 + 12263 mRNA_3895 0.47 0.8
844,410 - 12263 mRNA_3895 0.51 -0.0
844,423 - 12263 mRNA_3895 0.53 0.2
844,543 + 12263 mRNA_3895 0.75 -0.6
844,665 - -0.5
844,671 - 0.7
844,678 + -0.6
844,699 + -0.8
844,708 + 0.8
844,709 + 1.4
844,711 - -0.5
844,713 + -0.5
845,136 - 12264 mRNA_3896 0.29 0.9
845,300 - 12264 mRNA_3896 0.44 -2.5
845,431 + 12264 mRNA_3896 0.55 1.0