Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3849

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3848: 12216 - KOG1817 Ribonuclease, at 733873 to 734892 12216 mRNA_3849: 12217 - Hypothetical Protein, at 735253 to 736177 12217

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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734,261 - 12216 mRNA_3848 0.38 -0.8
734,439 - 12216 mRNA_3848 0.55 1.1
734,683 + 12216 mRNA_3848 0.79 -0.0
734,797 + -0.6
734,841 + -1.3
734,982 - -0.4
735,148 + 0.0
735,170 - -0.4
735,180 + 0.7
735,237 - 0.6
735,274 + -0.9
735,304 - -0.7
735,310 + 1.0
735,312 + 0.4
735,314 + -0.2
735,317 - 0.3
735,327 - 1.6
735,370 - 12217 mRNA_3849 0.13 -1.1
735,396 - 12217 mRNA_3849 0.15 -0.0
735,438 - 12217 mRNA_3849 0.20 0.9
735,446 + 12217 mRNA_3849 0.21 -0.8
735,456 + 12217 mRNA_3849 0.22 0.3
735,500 + 12217 mRNA_3849 0.27 0.4
735,518 - 12217 mRNA_3849 0.29 -0.3
735,521 + 12217 mRNA_3849 0.29 0.6
735,568 + 12217 mRNA_3849 0.34 -0.3
735,590 - 12217 mRNA_3849 0.36 0.8
735,605 + 12217 mRNA_3849 0.38 0.3
735,612 + 12217 mRNA_3849 0.39 -2.0
735,626 + 12217 mRNA_3849 0.40 0.4
735,668 + 12217 mRNA_3849 0.45 0.1
735,701 + 12217 mRNA_3849 0.48 -0.1
735,715 + 12217 mRNA_3849 0.50 0.0
735,794 + 12217 mRNA_3849 0.58 -1.0
735,815 - 12217 mRNA_3849 0.61 -0.8
735,862 - 12217 mRNA_3849 0.66 -0.3
735,900 + 12217 mRNA_3849 0.70 0.3
735,901 + 12217 mRNA_3849 0.70 -1.1
735,906 - 12217 mRNA_3849 0.71 -0.6
735,925 - 12217 mRNA_3849 0.73 0.3
735,969 - 12217 mRNA_3849 0.77 -0.8
735,999 - 12217 mRNA_3849 0.81 -1.7
736,031 + 12217 mRNA_3849 0.84 2.3
736,042 - 12217 mRNA_3849 0.85 1.4
736,082 + 12217 mRNA_3849 0.90 -0.5
736,101 + 1.2
736,224 + 0.2
736,231 - 0.4
736,346 - -0.7
736,370 + -0.3
736,390 + -0.6
736,818 + 0.8
736,953 + 0.1
736,966 - -0.9
737,098 + -0.3
737,106 + -0.1
737,111 + 0.3
737,129 + -1.4
737,131 + 0.1