Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3839

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3838: 12206 - HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961, at 706826 to 713191 12206 mRNA_3839: 12207 - BLAST E3 ubiquitin-protein ligase RNF213 [Mus musculus] [Rh..., at 713356 to 714077 12207 mRNA_3840: 12208 - K18849 BMT2 25S rRNA (adenine2142-N1)-methyltransferase, at 714373 to 715825 12208

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
712,423 - 12206 mRNA_3838 0.88 0.2
712,660 + -0.3
712,686 - 0.5
712,990 + -1.1
713,000 - -1.1
713,141 - -0.2
713,311 + -0.4
713,424 - -0.3
713,568 + 12207 mRNA_3839 0.29 -0.2
713,577 - 12207 mRNA_3839 0.31 0.5
714,021 + 0.6
714,033 + -1.1
714,091 - -1.4
714,301 - 1.1
714,740 + 12208 mRNA_3840 0.25 0.3
715,003 + 12208 mRNA_3840 0.43 1.4